bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3119_orf3
Length=260
Score E
Sequences producing significant alignments: (Bits) Value
273068.TTE2327 216 8e-55
> 273068.TTE2327
Length=816
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 170/270 (62%), Gaps = 16/270 (5%)
Query 4 LGGAKVTAAVVEVFLRARRMAEA--------ESCLVSMQHIFLALLHSP--TFYRTLVNS 53
+G + VV RA+R+ E + V +HI L LL R L+
Sbjct 69 IGMGNIPGDVVGYTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQ 128
Query 54 GCDIDLFKEELALAYKNTPMPSTSGSTEHVAKDFD---LSQYGEDLTEKARLGKLQPVIG 110
G D + +EE+ P S ++ AK+ + L+Q+G DLT+ AR GKL PVIG
Sbjct 129 GIDFNRVREEIVKMLSEEPAAGPSKVSK--AKNTNTPTLNQFGRDLTDLARDGKLDPVIG 186
Query 111 RQEEIDRIAQILSRMMTKAPLLIGEPGVGKTAVIEGLAQRIVERAVPKALQDRRIFSLDL 170
R++EI+R+ QILSR P+LIGEPGVGKTA++EGLAQ+IVE VP+ L+D+R+ +LDL
Sbjct 187 REKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEVPEILKDKRVVTLDL 246
Query 171 LNLSAGTSMRGEFERRMKDIIAYLQRHKREVILFVDEIHTLVGAGKTAGSSDATQILKVP 230
+L AGT RGEFE R+K +I + + VILFVDE+HTL+GAG G+ DA+ ILK
Sbjct 247 ASLVAGTKYRGEFEDRLKTVINEVIKAGN-VILFVDEMHTLIGAGAAEGAIDASNILKPA 305
Query 231 LARGEIVLVGATTLEEYKLHIEKDAAFCRR 260
LARGEI ++GATTL+EY+ ++E+D A RR
Sbjct 306 LARGEIQVIGATTLDEYRKYVERDPALERR 335
Lambda K H
0.321 0.136 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 81680956335
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40