bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3119_orf3 Length=260 Score E Sequences producing significant alignments: (Bits) Value 273068.TTE2327 216 8e-55 > 273068.TTE2327 Length=816 Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 124/270 (45%), Positives = 170/270 (62%), Gaps = 16/270 (5%) Query 4 LGGAKVTAAVVEVFLRARRMAEA--------ESCLVSMQHIFLALLHSP--TFYRTLVNS 53 +G + VV RA+R+ E + V +HI L LL R L+ Sbjct 69 IGMGNIPGDVVGYTPRAKRVLELSLSEARRFNTSYVGTEHILLGLLREGEGVAVRILMEQ 128 Query 54 GCDIDLFKEELALAYKNTPMPSTSGSTEHVAKDFD---LSQYGEDLTEKARLGKLQPVIG 110 G D + +EE+ P S ++ AK+ + L+Q+G DLT+ AR GKL PVIG Sbjct 129 GIDFNRVREEIVKMLSEEPAAGPSKVSK--AKNTNTPTLNQFGRDLTDLARDGKLDPVIG 186 Query 111 RQEEIDRIAQILSRMMTKAPLLIGEPGVGKTAVIEGLAQRIVERAVPKALQDRRIFSLDL 170 R++EI+R+ QILSR P+LIGEPGVGKTA++EGLAQ+IVE VP+ L+D+R+ +LDL Sbjct 187 REKEIERVIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQKIVEGEVPEILKDKRVVTLDL 246 Query 171 LNLSAGTSMRGEFERRMKDIIAYLQRHKREVILFVDEIHTLVGAGKTAGSSDATQILKVP 230 +L AGT RGEFE R+K +I + + VILFVDE+HTL+GAG G+ DA+ ILK Sbjct 247 ASLVAGTKYRGEFEDRLKTVINEVIKAGN-VILFVDEMHTLIGAGAAEGAIDASNILKPA 305 Query 231 LARGEIVLVGATTLEEYKLHIEKDAAFCRR 260 LARGEI ++GATTL+EY+ ++E+D A RR Sbjct 306 LARGEIQVIGATTLDEYRKYVERDPALERR 335 Lambda K H 0.321 0.136 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 81680956335 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40