bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3111_orf3
Length=268
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL2225w 156 6e-37
> 5833.PFL2225w
Length=204
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query 68 CPICYHKLPRPGEVLEPYDEELNYFMWIPGFEWKPKP--VPEDDAYGSEHSESEGEADED 125
C +CY LP P L PYD ELNYF W PGFE++P+P P E+SE E+ D
Sbjct 5 CNVCYFNLPDPESTLGPYDNELNYFTWGPGFEYEPEPQRKPLSIEESFENSEESEESVAD 64
Query 126 MEEALKEMVENDEMQQKYNEKASGGKVSTSDAAVLARQLGLAPSYADVEKCEQENGNQLD 185
+++ L+E V+ +++ +NEK+SGGK+S +A+ AR+LGLAPS D +K ++ G+ L
Sbjct 65 IQQ-LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLT 123
Query 186 YATFQQFAAQSTHPEDNIEDLVGAFAHFDPNGTGTLTVQQMRNILMTFGEPLTKEEMSVV 245
Y + ++ + H +DN+E+L+ FAHFD N TG LT QM+NIL T+G+ LT +E
Sbjct 124 YEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDA 183
Query 246 ESKFFSGNTVDYRDFCTRVL 265
+ F S + +DY+ FC +L
Sbjct 184 LNAFSSEDNIDYKLFCEDIL 203
Lambda K H
0.312 0.131 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 85563639990
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40