bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3081_orf1
Length=125
Score E
Sequences producing significant alignments: (Bits) Value
28985.KLLA0F24134g 85.1 5e-16
> 28985.KLLA0F24134g
Length=1000
Score = 85.1 bits (209), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 20/126 (15%)
Query 6 LVEYSGEVYVHPKHKRYPPPQLAELREARYDWQH-GNCYCFAVEENLCTRYVDATDTGNL 64
++EY GE P +AE+RE RY G+ Y F ++EN +DAT G +
Sbjct 884 IIEYVGESIRQP---------VAEMREKRYIKSGIGSSYLFRIDENTV---IDATKRGGI 931
Query 65 ARYINHCCEPNAESVLL---GDSIVGIAALRDIPPGEEVFYDYHFSDSSKEA----CLCQ 117
AR+INHCCEP+ + ++ G + I ALRDI EE+ YDY F + E CLC
Sbjct 932 ARFINHCCEPSCTAKIIKVDGRKRIVIYALRDIGTNEELTYDYKFERETDEGERLPCLCG 991
Query 118 APTCTG 123
AP+C G
Sbjct 992 APSCKG 997
Lambda K H
0.320 0.138 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22670743557
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40