bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3065_orf1
Length=343
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0072 179 9e-44
> 5833.PF10_0072
Length=646
Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 29/311 (9%)
Query 2 PGKKLVIRDLTFVVWATDPDNGPGFVRKDTAMYISVDPWGEYRRVHILPFADTLPTTYSF 61
GK +I + TF+ D D GF+ K+T + +SVD + +Y+ VHI+P DTLPTTY++
Sbjct 359 SGKLFLINNFTFLTLKIDSDVNVGFIDKNTEIILSVDTYEQYKNVHIVPMYDTLPTTYNY 418
Query 62 RLFEDYLQPFLKEQPWRLIRKGDIFTFRGVEFKVIATEPSTIPV--ARVGPETVVHFEGS 119
LF DY++P+++ + D F ++GV+FK++ +P I R+ T ++ EG
Sbjct 419 DLFMDYVKPYIERHYLNVYSIHDTFFYKGVQFKIMGIDPVNIKYGKGRISCNTFIYTEGC 478
Query 120 LNPSLIDILPPDILSRVRRLPARVQPFAIVAAAQSLDPQLLLRVLPSG--NMRGNPRGID 177
+ P+ D++ + ++ +R LP +P+AI+ Q LD LLR+ PS N+R N + +
Sbjct 479 IKPTFFDVISKESINYIRSLPFEYKPYAILNILQHLDSDSLLRLFPSSNINIRENHKKEE 538
Query 178 EGLEAAVERQLVGPFCLSAYQRLYAHLCTRKKRHPSREKREEAEANGEADAPGCSQEIPS 237
+ LE + + + K + ++ E ++ + + +++
Sbjct 539 KLLEQLTKHKYI--------------FNKNFKNNYTKNSLENNDSKNKENYHHINRKREL 584
Query 238 SRSSTAEAEAAVAEAAAGGWELEAPCCTVCTLQLQDGAESVTLTCGHAFHWDCARAWLRC 297
+++ + E C VC QD + + LTC H +HW C + W +
Sbjct 585 HTTTSTLKSNLINEQ-----------CAVCFEYFQDYDKCIKLTCLHTYHWKCVKNWFKF 633
Query 298 SATCPNCRAEV 308
+ TCP CR ++
Sbjct 634 NLTCPCCRYKL 644
Lambda K H
0.321 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 127353757638
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40