bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3015_orf2 Length=158 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0272 237 9e-62 > 5833.PF11_0272 Length=156 Score = 237 bits (604), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 110/155 (70%), Positives = 135/155 (87%), Gaps = 0/155 (0%) Query 4 MSLRATNMADFQHILRVLNTNVDGREKVVIALTAIRGIGRRISTLICKKADIDTDKRAGE 63 MSL+ + DFQHILR+LNTNVDG+EKV+IALTAI+GIG+R++T+ICK+A++D KRAGE Sbjct 1 MSLQVIDNNDFQHILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGE 60 Query 64 LTADEISKIVAIVASPTQFSIPSWFLNRQKDVKDGKSRHVSANNLDSVWREDFERLKKMR 123 LT +EI IV I+++PTQF IP WFLNR+KD+K+GK+ HV AN LDS RED ER+KK+R Sbjct 61 LTTEEIDNIVHIMSTPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIR 120 Query 124 LHRGLRHYWGLKVRGQHTKTTGRHGRTVGVAKKKA 158 LHRGLRH+WGL+VRGQHTKTTGR GRTVGVAKKK Sbjct 121 LHRGLRHHWGLRVRGQHTKTTGRRGRTVGVAKKKG 155 Lambda K H 0.320 0.133 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 25621323489 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40