bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2997_orf4 Length=315 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL2275c 248 2e-64 > 5833.PFL2275c Length=304 Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/266 (47%), Positives = 174/266 (65%), Gaps = 5/266 (1%) Query 55 VDVSGDGGVIKRVLVQGT-GER--PPKGYEVEVHYVGKLED-GTQFDSSRDRDSPFRFVL 110 V+++ DGGVIK +L +G GE P KG EV VHYVGKLE G FDSS DR+ PF+F L Sbjct 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHL 69 Query 111 GEGQVIKGWDLGVATMSVGEKSMLTIQPTYGYGEAGAGGTIPPNATLKFEVELLSFRAKA 170 +G+VIKGWD+ V++M EK ++ I+ YGYG+ G G +IP N+ L FE+ELLSFR Sbjct 70 EQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFREAK 129 Query 171 KQRWAMSVEEKIQAAADEKEKGNAAFKKKDLAEAAAAYREGLAFLEHSSHWSPQ-QQTLK 229 K + + EEK+Q+A D KE+GN FKK ++ EA Y+E L F H+ W Q K Sbjct 130 KSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKK 189 Query 230 LSVEVSLRLNLSNCYLKTGEFAQAIDEASAAIKLDEKNSKAWYRRGVARAAFGLLDEARS 289 ++E+S LNL+ CY K ++ +AID AS +K+D+ N KA Y+ GVA FG L+EA+ Sbjct 190 KNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKE 249 Query 290 DLAAAARIDPKNVEIRNELKKCKEKL 315 +L AA ++P N++IRN + C KL Sbjct 250 NLYKAASLNPNNLDIRNSYELCVNKL 275 Lambda K H 0.314 0.130 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 111750132791 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40