bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2995_orf2
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
8090.ENSORLP00000012015 376 3e-103
> 8090.ENSORLP00000012015
Length=263
Score = 376 bits (966), Expect = 3e-103, Method: Compositional matrix adjust.
Identities = 177/261 (67%), Positives = 209/261 (80%), Gaps = 0/261 (0%)
Query 5 MARGPKKHLKRLAAPSHWMLNKITGHYAPRPSPGPHKLRECLPLAILLRNRLKYALTYQE 64
MARGPKKHLKR+AAP HWML+K+TG +APRPS GPHKLRECLPL I LRNRLKYALT E
Sbjct 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query 65 TKLIVMQRLVKVDGKVRTDQCYPAGFMDVVSLEKTQQHFRLLLDTKGRFVPRPISAEEAS 124
K I MQR +K+DGKVRTD YPAGFMDV+S+EKT +HFRL+ D KGRF I+ EEA
Sbjct 61 VKKICMQRFIKIDGKVRTDVTYPAGFMDVISIEKTGEHFRLIYDVKGRFTVHRITGEEAK 120
Query 125 YKLCRVKKVLIGPKAIPMLVTHDARTIRFPHPNIKVHDTIRLSIADSKIVDTYKFEVGNV 184
YKLC+V+K++IG K IP LVTHDARTIR+P P IKV+DT+R+ + KI D KF+ GN+
Sbjct 121 YKLCKVRKIIIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLETGKITDFIKFDTGNL 180
Query 185 AMVTGGHNVGRVGTIVNRERHLGSFDIVHLRDSRGNEFATRISNVFVIGKGEKPMVSLPK 244
MVTGG N+GR+G I NRERH GSFD+VH++DS GN FATR+SN+FVIGKG KP VSLP+
Sbjct 181 CMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPR 240
Query 245 DKGIRLTIFEDRQLKLKKNAG 265
KGIRLTI E+R +L G
Sbjct 241 GKGIRLTIAEERDKRLAAKQG 261
Lambda K H
0.323 0.139 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84358518300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40