bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2965_orf1 Length=456 Score E Sequences producing significant alignments: (Bits) Value 10090.ENSMUSP00000066050 175 2e-42 > 10090.ENSMUSP00000066050 Length=330 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/225 (42%), Positives = 134/225 (59%), Gaps = 23/225 (10%) Query 238 PSNSLHVIWEGSGPGTNRKFFFDPMDIVVDESESGSLEVLYLCKVARFEDPRTGDASEHG 297 P LH WEG+GP +R ++ ++V + +Y V + + TG +E Sbjct 92 PGGELH--WEGNGPHHDRCCTYNEDNLV---------DGVYCLPVGHWIEA-TGHTNEMK 139 Query 298 HTTFFYNTVKAEGRMHYSRILPNLYVGSCPRQLKHIR-QLKEELKVTVVFNMQTADDMKT 356 HTT FY + MHYSRILPN+++GSCPRQL+H+ +LK EL VT V N QT D+ Sbjct 140 HTTDFYFNIAGHQAMHYSRILPNIWLGSCPRQLEHVTIKLKHELGVTAVMNFQTEWDIIQ 199 Query 357 N------FPDPLASKRTPEAAGQLYESAGLRYVWMPTEDMSDACRKLAVAQCALILDALI 410 N +P+P+ TP+ +LY+ GL Y+WMPT DMS R + Q +L AL+ Sbjct 200 NSSGCNRYPEPM----TPDTMMKLYKEEGLSYIWMPTPDMSTEGRVQMLPQAVCLLHALL 255 Query 411 QNGHSVYVHCNAGVGRSVAAVGAYLCFCVGLDVRKVNFSVSTKRP 455 +NGH+VYVHCNAGVGRS AAV +L + +G ++RKV + + KRP Sbjct 256 ENGHTVYVHCNAGVGRSTAAVCGWLHYVIGWNLRKVQYFIMAKRP 300 Lambda K H 0.319 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 190402225236 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40