bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2940_orf1 Length=330 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL8P1.83 157 3e-37 > 5833.MAL8P1.83 Length=266 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 45/292 (15%) Query 55 MTTDRKWADFELEDDGDLGDLAPTPGGFETRPDSD---------------GIKTVTNYLQ 99 + T++KWAD +++DD + D + D D GIK VT Y + Sbjct 2 IQTEKKWADIDVDDDESINDNEIKKKWEDIDADDDLEANKKLSYFTNYENGIKVVTKYSE 61 Query 100 NAKGETLKIVKRIKVTRVVHRINKAVHERRNLPLFGIEAAEGSTGKAFTVRSVE---EIP 156 N K +T + K+I+ + ++NK ++ R NL F I+ T + V ++E P Sbjct 62 NLKKQT--VTKKIQEVVIKKKLNKEINNRLNLKNFNIDIHSSVTVEPTDVVNIEVPKNNP 119 Query 157 LEISKETLLRAKFKEDEDDEDIQFADLNPAKTSRDLRQKFLSLQNDYEPVDAGEGDPLGS 216 L+ K+T + D FA+ KT++DL+ +F L+ D E D DP Sbjct 120 LDFLKDT-----------EYDYLFAE-QTNKTAKDLKNRFKILK-DEETEDVKAEDP--- 163 Query 217 RLGVPGAKGLSRLRGGGDALKDLEARRREEATIRVTNLSEDAKEEDLAELFGNIGKLERV 276 +K R G D + + E T+RVTNLSED E +L+ LFG +G + R+ Sbjct 164 ------SKAAGRREGLYYRPHDTQNK---ECTVRVTNLSEDVNENELSNLFGKVGNIVRM 214 Query 277 FLAKHKDKKASKGFAFITYANRELAAQAIRKLNRHGYDNLLLNVEWARPNNR 328 FLAKHK+ + SKGFAFITY+ RE A +AI KLNRHG++NLLL+VEWA+P+NR Sbjct 215 FLAKHKETQNSKGFAFITYSKREEAKRAIEKLNRHGFENLLLSVEWAKPSNR 266 Lambda K H 0.317 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 120714047186 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40