bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2939_orf3 Length=407 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000013321 256 7e-67 > 69293.ENSGACP00000013321 Length=504 Score = 256 bits (655), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 200/318 (62%), Gaps = 4/318 (1%) Query 33 GHVLCCICGAVTPPHPRNKCLSCLQDEIDLSSRVCRTFVVDRCRQCGRFKDSQGKWLSCE 92 G++LCC CG PP+P N C++CL+ ++D+S + + V+ C+QC R+ W+ C Sbjct 13 GNILCCTCGVPIPPNPANMCVACLRTQVDISEGIPKQVTVNFCKQCERYLQPPATWMQCA 72 Query 93 LESRELLALCLKRIRGLKSLSRISDCRWLYSEPHSNKLLLRLTARADVLEGKAEVEQSFN 152 LESRELLALCLK+I+ + R+ D +L++EPHS ++ ++LT + +V+ G A ++Q F Sbjct 73 LESRELLALCLKKIKSSMTKVRLIDAGFLWTEPHSKRIKMKLTIQKEVMNG-AILQQVFV 131 Query 153 VSGLVHNMQCDECKQAFTPHAGWGARVQVRQRCDHKRTFLFLEQLLLQQQHLLQKLLRVV 212 V ++ CD+C + W A VQVRQ+ HK+TF +LEQL+L+ + L Q L + Sbjct 132 VEYVIQYQMCDDCHRV-EAKDFWKAVVQVRQKTVHKKTFYYLEQLILKHK-LHQNALNIK 189 Query 213 QRRDGLDFYFPNKQAAASFVSFCSSRLPCSSRSSKQLISHDCNSNTYFYKHTVYVELPAI 272 + DG+DFY+ +KQ A V F +PC S++S++LISHD +SNT+ YK T +E+ + Sbjct 190 EVNDGIDFYYASKQHAMKMVDFLQCTVPCRSKTSQRLISHDIHSNTFNYKSTFSLEIVPV 249 Query 273 CRDDLVYIPAKKAQDSFGGFPSLSLCTRVSSTLHLTDPFSGRHLDMAADVYFRDTFKPIC 332 C+D++V + + AQ S G + +C RV+ST+HL DP + + ++ + Y+R+ F +C Sbjct 250 CKDNVVCLSPRLAQ-SLGNMGQVCVCVRVTSTIHLIDPNTLQIAEVDGNTYWRNPFYSLC 308 Query 333 TRKHLSHFLIVAVTPLQQ 350 R+ L F+++ L+ Sbjct 309 NRRQLEEFIVMDTDTLRN 326 Lambda K H 0.324 0.134 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 164157884257 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40