bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2931_orf2
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF07_0088 324 1e-87
> 5833.PF07_0088
Length=195
Score = 324 bits (830), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 150/189 (79%), Positives = 172/189 (91%), Gaps = 0/189 (0%)
Query 14 DFKLFGRWTYDDVTVSDLSLVDYLAVKGKAAVLTPHTAGRYQKKRFRKAQCPLVERLVNS 73
D KLF +W+Y+++ ++DLSLVD +AV KA V TPHTAGRYQKKRFRKA CP+VERLVNS
Sbjct 7 DIKLFKKWSYEEINIADLSLVDCIAVSQKACVYTPHTAGRYQKKRFRKALCPIVERLVNS 66
Query 74 LMMHGRNSGKKLQAIRIVQHAFDIIALMADKNPLQVLVQAVERGGPREDSTRIGSAGVVR 133
+MMHGRN+GKKL+AIRIV +AF+II LM +NPLQV V AV++GGPREDSTRIGSAGVVR
Sbjct 67 MMMHGRNNGKKLKAIRIVAYAFEIIHLMTGENPLQVFVNAVQKGGPREDSTRIGSAGVVR 126
Query 134 RQAVDVSPLRRVNQAIYLICTGARTAAFRNLKSMSECLADEIMNCAKESSNSYAIKKKDE 193
RQAVDVSPLRRVNQAIYLICTGAR AAFRN+KS+SECLA+EI+NCA ESS+SYAIKKKDE
Sbjct 127 RQAVDVSPLRRVNQAIYLICTGARNAAFRNIKSISECLAEEIINCANESSSSYAIKKKDE 186
Query 194 IERVAKANR 202
IERVAKANR
Sbjct 187 IERVAKANR 195
Lambda K H
0.320 0.131 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 48999515920
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40