bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2916_orf3
Length=212
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0107 99.4 7e-20
> 5833.PF10_0107
Length=119
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 25/131 (19%)
Query 77 KKQQQQEQPAVAVNQPEVEDLRKRLQGGMAIIVLLQDGTKLACTLHLNPSDKSLSISCED 136
KK ++ + E+ + +KRL+ + I+VLLQ
Sbjct 14 KKYLNDDEILETFSNSEINEFKKRLKNNIQIVVLLQ------------------------ 49
Query 137 KVRVIPLSDVKSLLHTRDQLKRVETKANLVDDENCVALHLIESGNCIPIRFEAVKDKHIF 196
VR+I SD++SLL+ +QLKRVET+ANL++D C+ALHL +SGNCIPI+F +VK+K++F
Sbjct 50 -VRMINFSDIRSLLYGEEQLKRVETQANLINDNCCLALHLDDSGNCIPIKFGSVKEKNLF 108
Query 197 VEMMKQLKEEA 207
+ +MK K+ +
Sbjct 109 IFIMKDYKKNS 119
Lambda K H
0.309 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 54290949897
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40