bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_2850_orf3
Length=225
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFI0945w                                                        246    3e-64


> 5833.PFI0945w
Length=207

 Score =  246 bits (629),  Expect = 3e-64, Method: Compositional matrix adjust.
 Identities = 113/206 (54%), Positives = 145/206 (70%), Gaps = 7/206 (3%)

Query  13   QYCSPYNAEKRRFNEEQILAAGGKEGAAAPAMPMPPAYRDMDLILFPEGSLKDSNGNVVS  72
             + SPY AEKRR +E         +      + MP  Y DMDLILFPEGSLK+ N  VV+
Sbjct  5    NFNSPYQAEKRRTSE-------NADNCKLETLNMPINYSDMDLILFPEGSLKNINNTVVN  57

Query  73   QQHLIGKSVGLYFADGSSPKCSSFLPFLLQFYRTVNEGGSHQKIEVVFVSADKDERAFQD  132
            ++HL GKSV ++F++GS PKC +FLPFL Q+Y+T+NEGGS QKIEV+FVS D D ++F+D
Sbjct  58   EKHLFGKSVAIFFSNGSDPKCRAFLPFLQQYYKTINEGGSSQKIEVIFVSIDPDRKSFED  117

Query  133  HVKHMPWLVIDFNDPLRTILLRHFRVEKEASVPTQGQGPRAGVPSLVVVGSDGRDAQFLQ  192
            H KHMPWL +D  DPL  IL +HFRV     VP  G GPR+ VP L+VVGSDGR++Q L 
Sbjct  118  HKKHMPWLYVDVADPLTDILKKHFRVTNSHEVPFYGSGPRSDVPCLIVVGSDGRESQLLH  177

Query  193  VSGGRDEGERALLRWDWRNTKFGADR  218
            +  GRDEGE+ LLRWD+RN  +  ++
Sbjct  178  ICSGRDEGEKGLLRWDFRNNIYTPNK  203



Lambda     K      H
   0.321    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 61360267097


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40