bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2829_orf1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0965c 218 9e-56
> 5833.PFE0965c
Length=165
Score = 218 bits (555), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/162 (67%), Positives = 132/162 (81%), Gaps = 0/162 (0%)
Query 40 QCDPNSVFFGFMGITSAIVFANLGAAYGTAKSGVGVSSVGVMRPDLIMRSILPVIMAGIL 99
QCDPNS FFGFMGI ++ +F+NLGAA+GTAKSGVGV SVGVMRPDLIM+SILPV+MAG+L
Sbjct 3 QCDPNSAFFGFMGIAASSIFSNLGAAFGTAKSGVGVCSVGVMRPDLIMKSILPVVMAGVL 62
Query 100 GIYGLIISIVISSVMGSPDVYSAYAGFGHLAGGLAVGLSSLAAGLAIGIVGDAGVRANAQ 159
GIYG+I+SI+I M + YS +AG+ HL+ GL VGLSSLAAGLAIGIVGDAGVRANAQ
Sbjct 63 GIYGIIMSILIYGKMTPAEGYSTFAGYAHLSSGLIVGLSSLAAGLAIGIVGDAGVRANAQ 122
Query 160 QPKLFFGVTLILIFAEAIGLYGLIIALVIVTRKVDGLCTSYK 201
Q +LF G+ LIL+F+E + LYGLII + I + LCT Y
Sbjct 123 QNRLFIGMILILVFSETLALYGLIIGIYISIAETPKLCTPYN 164
Lambda K H
0.327 0.143 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 48999515920
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40