bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2822_orf1 Length=129 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_5060 174 8e-43 > 5807.cgd7_5060 Length=135 Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 80/112 (71%), Positives = 102/112 (91%), Gaps = 2/112 (1%) Query 20 LEGEEQR--LHRIRITLTSKDLKSIERVCSELIGAAKQRKLQTNGPVRLPVKTLRVTTRK 77 GE+Q+ LH+IRITL+SK+LKSIERVC++LI +AKQ+ L+ GPVR+PVKTLR+TTRK Sbjct 24 FNGEQQQAPLHKIRITLSSKNLKSIERVCADLIQSAKQKDLKVTGPVRMPVKTLRITTRK 83 Query 78 SPCGEGTNTYDRFELRIYKRLIDLHSASDVVRQITSINIDPGVEVEVTVSNI 129 SPCGEG+ T+DR+E+RIYKR+IDL+S+SDVV+QITSINID GVEVEVT+S+I Sbjct 84 SPCGEGSKTWDRYEMRIYKRVIDLYSSSDVVKQITSINIDAGVEVEVTISDI 135 Lambda K H 0.317 0.133 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22342951125 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40