bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2821_orf2 Length=216 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0288 238 8e-62 > 5833.PF14_0288 Length=172 Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 106/131 (80%), Positives = 116/131 (88%), Gaps = 0/131 (0%) Query 86 QNVSAADYPTPAKYLENPDLIPTYYTFQSNMVSDEDLLPGMLRNLEVDRRLTLPTRTHIR 145 +NV A DYP P KYLE+PD IP YY FQSNMV+DEDL PGMLR LEVD+RLTLPTRTHI Sbjct 35 ENVRAEDYPIPEKYLEDPDKIPKYYVFQSNMVTDEDLQPGMLRQLEVDKRLTLPTRTHIS 94 Query 146 FLVTATDVIHSWAVPALGIKADAIPGRLQKVNTFIQREGVFYGQCSELCGALHGFMPIVV 205 FLVTATDVIHSW++P+LGIKADAIPGRL K+ TFI REGV+YGQCSE+CG LHGFMPIVV Sbjct 95 FLVTATDVIHSWSIPSLGIKADAIPGRLHKITTFILREGVYYGQCSEMCGTLHGFMPIVV 154 Query 206 EAVSPETYAAH 216 EAVSPE YAAH Sbjct 155 EAVSPEAYAAH 165 Lambda K H 0.318 0.130 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 56730992589 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40