bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2807_orf4
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
4932.YIL082W-A 117 1e-25
> 4932.YIL082W-A
Length=1498
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 0/140 (0%)
Query 1 HCRASKCLNQKPAGLRQQLLIPSRRWADVSLDFITDLLLTTTGHDSILVMVDSLSKMAHF 60
C+ K + GL Q L I RW D+S+DF+T L T+ + ILV+VD SK AHF
Sbjct 1170 QCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHF 1229
Query 61 VPAKKSFTAADTVELLAGRLIRYHGFPEVLTSDRDPRFQSDLRNQLCRRFNIKRCISLSY 120
+ +K+ A ++LL + YHGFP +TSDRD R +D +L +R IK +S +
Sbjct 1230 IATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSAN 1289
Query 121 HPQSDGQTERVNRTLEQMLR 140
HPQ+DGQ+ER +TL ++LR
Sbjct 1290 HPQTDGQSERTIQTLNRLLR 1309
Lambda K H
0.324 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22827922775
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40