bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_2754_orf1
Length=243
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT4G12400.2                                                     150    4e-35


> 3702.AT4G12400.2
Length=558

 Score =  150 bits (378),  Expect = 4e-35, Method: Compositional matrix adjust.
 Identities = 84/193 (43%), Positives = 115/193 (59%), Gaps = 18/193 (9%)

Query  59   AQEEKAKGNAAFQNGDFHAAVQHFTNAIQLSPQDHLLYSNRSGAFASLKDFENALKDAET  118
            A+E K+KGNAAF +GD+  A+ HFT AI LSP +H+LYSNRS ++ASL  +E AL DA+ 
Sbjct  2    AEEAKSKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKK  61

Query  119  CVKLKPDWAKGYSRKGLAEFNLGRLGEAERSYSKGLELEPSNEGLQKGLKEVQQSGASLR  178
             ++LKPDW+KGYSR G A   L +  EA  SY KGLE++PSNE L+ GL +  +S  S +
Sbjct  62   TIELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKSGLADASRSRVSSK  121

Query  179  DM--------HALWAVSTALNRHPKLLKYSQQDPNYSKTLAKLLSQVQANPSSLRLVMAQ  230
                        +W   TA    P    Y +QD        K + ++Q NP++L L M  
Sbjct  122  SNPFVDAFQGKEMWEKLTA---DPGTRVYLEQD-----DFVKTMKEIQRNPNNLNLYMK-  172

Query  231  PDVRIREGMTVLL  243
             D R+ + + VLL
Sbjct  173  -DKRVMKALGVLL  184



Lambda     K      H
   0.318    0.131    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 71395206278


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40