bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2752_orf6 Length=417 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_2430 341 2e-92 > 5807.cgd7_2430 Length=460 Score = 341 bits (875), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 186/427 (43%), Positives = 255/427 (59%), Gaps = 59/427 (13%) Query 6 VNIPRDREDPNYRYKMPKLLSKIEGRGNGIRTNVYNMGEIARALKRPPMYPTKFFGCELG 65 +NIP +DPNYRYKMPKL+SKIEGRGNGIRT + NM +IAR+LKRPP YPTKFFGCELG Sbjct 2 LNIPSTVDDPNYRYKMPKLVSKIEGRGNGIRTKIVNMADIARSLKRPPAYPTKFFGCELG 61 Query 66 AMVKFEENEEKALINGAHSEEDLVAILDKFIQMYVLCGGCDLPEIDITVKKGVLVCKCNA 125 A+ K+E+ EEK+++NGAH + DL ++DKFIQMYVLC C+LPEIDI VKK + CKCNA Sbjct 62 ALSKWEDKEEKSIVNGAHQQNDLQRLMDKFIQMYVLCPNCELPEIDIIVKKERVSCKCNA 121 Query 126 CGYSGTLDNTHKAATYMAKNPPNATETTLGKKKKTKEERRAEKHAKEEDKSEKTGKEKKS 185 CGY G LDN HK TY++KNPP E+T+G K K KE++ Sbjct 122 CGYIGALDNNHKITTYISKNPPGGVESTMGSKNK---------------------KERRE 160 Query 186 KDKDKKKKKGEEENDTDCLNSKAVDHSGDATPTNAGEDSWDEEKSSEADKKEKKKKEKKH 245 +DKD+ + C NS G + D EK S+ K+ KK K Sbjct 161 RDKDRSSEG--------CNNSN-------------GSTAADNEKPSKHKSKKASKKSSKK 199 Query 246 ANAEGPKLVVKEALTINCPEIAEVAARLRNMIVTSSAVTPDSFFVELRMLQVSQDFDAKC 305 + E + K+ LT PEI +V RL N + + V+P+ FF ELR+LQVSQDFD Sbjct 200 SPHE-LDIFEKDVLTFESPEIVDVIERLTNFMQKNEEVSPEDFFSELRVLQVSQDFDEFM 258 Query 306 RMYVVLSALF--KDGLSPELLEEKMAFVAKCCDSSVHASDLLSALENFCFENPHTAMAGY 363 R V+L+ LF KD + P++ + ++ +++K + S+ ++ ++S E++C E + +A Y Sbjct 259 RFSVLLAVLFGLKDPIDPKVFKLRIPYISKAVEGSLRSNAIISIFESYCVEKNPSTLATY 318 Query 364 PYMLQRLYNAELLEPEDILAYYNSPRADAATQKCRT---------FAEPFLKWLA----- 409 PY++Q+LY+A++L + IL YY + C T EPF+ WL Sbjct 319 PYLIQQLYDADILSEKVILKYYQKDAPTSWVSGCSTQDTFEKAKKSCEPFVDWLLDGSND 378 Query 410 EADSSDE 416 E+D SDE Sbjct 379 ESDLSDE 385 Lambda K H 0.313 0.129 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 168781316990 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40