bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2713_orf1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0579 126 2e-28
> 5833.PF14_0579
Length=121
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query 8 LKPGRVVVVLNGRMAGKKGVVVSTSEG-TKERHFCYCLVAGIEKAPLRVSKRMSTTKVQK 66
LKPG+V+++LNGR AGKK V+V+T EG T+ER + YCLVAGIEK PL+V+K M+ K+ K
Sbjct 5 LKPGKVIIILNGRRAGKKAVIVNTYEGQTRERPYSYCLVAGIEKHPLKVNKSMTKKKIVK 64
Query 67 RMRPKAFIRYVNVRHLMPTRYTVSNDFDVKALAPEASL 104
R + KAFI+ +NV H++PTRY V+NDFD+K+LA + L
Sbjct 65 RSKVKAFIKCINVNHILPTRYQVANDFDIKSLASDDVL 102
Lambda K H
0.319 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22935578866
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40