bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2698_orf1 Length=199 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_1200 260 2e-68 > 5807.cgd6_1200 Length=274 Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 125/198 (63%), Positives = 151/198 (76%), Gaps = 3/198 (1%) Query 3 EAMLEAAKTKRVACLVVGDPFCATTHSDLYLRARDKGVTVKVIHNASIMSAVAACGLQLY 62 + ++E AK K + LVVGDPFCATTHSDL LRA +K V V+V HNASI+SA+ GLQ+Y Sbjct 71 DEIIEEAKDKSIVLLVVGDPFCATTHSDLVLRAHEKDVKVEVRHNASIISAIGCTGLQVY 130 Query 63 RFGETVSVPFFDGGWKPVSFYEKIQKNRENNMHTLCLLDIKVKEQTVENLMKGNNIFEPP 122 RFGETVS+PFFDG W+P SFY+KI+ N E +HTLCLLDIKVKEQT+EN+M+ IFEPP Sbjct 131 RFGETVSIPFFDGSWQPSSFYDKIKANIERGLHTLCLLDIKVKEQTIENMMRNRPIFEPP 190 Query 123 RFMTVNTAIRQLFEAAEMQGDEGVAS--ILAFGLARVGADDQAIVSGPLQELLNADLGGP 180 RFMTVN AI QLF E + + V S LA G+AR+G+ DQ IVSG L EL + D G P Sbjct 191 RFMTVNQAISQLF-ILEDKLKQNVISPNSLAIGVARIGSSDQKIVSGTLSELSDTDFGNP 249 Query 181 LHSLVLCAPELHEIEQKF 198 LHSLV+C P+LH IEQ+F Sbjct 250 LHSLVICHPDLHLIEQRF 267 Lambda K H 0.321 0.135 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 47162034073 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40