bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2641_orf1 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_1150 137 7e-32 > 5807.cgd8_1150 Length=341 Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 59/79 (74%), Positives = 71/79 (89%), Gaps = 0/79 (0%) Query 58 DPNKPVRIYTDGVYDLLHLGHMRQLEQAKKMFKHVYLMAGVASDEETHRLKGQTVQSLEE 117 D N+ +RIY DGVYDLLHLGHMRQLEQAKKM+ + +L+ GVASDEETHRLKG+TVQ+L+E Sbjct 63 DTNRKIRIYADGVYDLLHLGHMRQLEQAKKMYPNTHLIVGVASDEETHRLKGRTVQTLQE 122 Query 118 RAETLRHIKWVDEVIAPLP 136 R ETLRH+KWVDE+I+P P Sbjct 123 RTETLRHVKWVDEIISPCP 141 Lambda K H 0.313 0.132 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40