bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2593_orf3 Length=293 Score E Sequences producing significant alignments: (Bits) Value 99883.GSTENP00014955001 288 2e-76 > 99883.GSTENP00014955001 Length=508 Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/254 (55%), Positives = 173/254 (68%), Gaps = 8/254 (3%) Query 21 DILEQLKADNRVQLRHCWRPGATAGLKAMKVFCTVPKLLAYTSRNNPVLDSQSGLSPWLH 80 ++L L D V RPGA AGL ++ F V + RN+P + S LSPW+ Sbjct 255 ELLSSLGVDRTVGETEWARPGAAAGLAMLESFIDVRLKRFDSQRNDPNAAALSQLSPWIR 314 Query 81 FGQISAQRCLASVKDMGPATKIGATTAAARESYIEELVVRRELAENFTFYNSKYNQITGA 140 FG +SAQR V+ G +G + S+IEELVVRREL +NF FYN KY+ + GA Sbjct 315 FGHVSAQRVALQVQRGGRKLGVGVS------SFIEELVVRRELTDNFCFYNEKYDSVEGA 368 Query 141 PIWAQETLAAHKNDKREHLYALEQLEGSKTHDELWNAAQLQLVHTAKMHGFLRMYWAKKI 200 WA++TL H DKR ++Y EQLE ++THD+LWNAAQ+ V KMHGFLRMYWAKKI Sbjct 369 YEWARKTLKDHAKDKRPYIYTREQLEKAETHDKLWNAAQV--VREGKMHGFLRMYWAKKI 426 Query 201 LEWTPSADIALTTALFLNDKFSLDGTDPNGVVGCMWSVAGVHDQGWAERPIFGKIRYMNL 260 LEWTPS + AL +AL+LND++ LDG DPNG VGCMWS+ G+HDQGWAERP+FGKIRYMN Sbjct 427 LEWTPSPEEALASALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWAERPVFGKIRYMNY 486 Query 261 AGCMRKFSVDAFVR 274 GC+RKF V AF R Sbjct 487 KGCLRKFDVAAFER 500 Lambda K H 0.320 0.133 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 99612876454 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40