bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2580_orf2
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
7227.CG2093-PA 124 3e-27
> 7227.CG2093-PA
Length=3242
Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 18/255 (7%)
Query 1 RHLSKILVSVDVLGNPALSLAHLQAGVYALARQPWEAAETG-GDVFEGMIRGAEDFLKHT 59
+ L +++ +DVLGNP + L+ GV L +P++ A G G+ EG++ G + HT
Sbjct 2906 KQLYVLVLGLDVLGNPYGLVVGLKKGVEDLFYEPFQGAIQGPGEFAEGLVLGVKSLFGHT 2965
Query 60 GYGLFGGISRMAGAASDSLGALACDEVYVSNRKKQGRHKARNVEEGLQQGVEALGKALAG 119
G G +S++ GA L AL DE Y R++ ++K +N EGL + + L
Sbjct 2966 VGGAAGAVSKITGAMGKGLAALTFDEDYQKKRRQGIQNKPKNFHEGLARSSKGLVMGFVD 3025
Query 120 GFTGLVEEPVRGAAEGGFEGLLRGAGRGIAGFLVKPLTGVLDFAQKTAEAIK---DASQV 176
G TG+V +PV GA + G EG +G G+G G + +P GV+DFA + EA+K DAS+
Sbjct 3026 GVTGVVTKPVTGARDNGVEGFFKGLGKGAIGLVARPTAGVVDFASGSFEAVKRAADASED 3085
Query 177 EGRQR-PRFRLPRLLLGNTRLLVAYDSEAAKAKAILAEAEGQYWENLPILFFALDRLLQC 235
R R PRF+ +L L+ EA K + +G+ F D + C
Sbjct 3086 VKRMRPPRFQHYDFVLRPYCLM-----EATGNKIMKETDKGK--------FATTDNFIHC 3132
Query 236 LTLVTENHVLLFKYY 250
++ ++ L+ Y
Sbjct 3133 EEIIQKSEYLVVTNY 3147
Lambda K H
0.319 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 124973313570
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40