bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2533_orf1 Length=154 Score E Sequences producing significant alignments: (Bits) Value 293826.Amet_2452 125 5e-28 > 293826.Amet_2452 Length=149 Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 1/132 (0%) Query 3 KVSTKGRYALRTMIDLTVNNTGNPIPLKDIATRQNISLKYMEQIISLLIKAKLVKSVRGN 62 K+STKGRY L+ M DL ++ PIPLK IA RQ IS Y+EQ+I+ L KA LVKSVRG Sbjct 2 KLSTKGRYGLKAMFDLAIHQGEGPIPLKHIAERQKISDHYLEQLIASLRKAGLVKSVRGA 61 Query 63 NGGYLLAKSSMQYTAGDILRAAEGDMAPIACI-EKDHCNCNRADYCSVLPFWLGLNKVIN 121 GGY+LA S + G+I+R EG + P C+ E+D C RADYC W + I+ Sbjct 62 QGGYMLANSPDKVVVGEIIRVLEGPLGPSECVLEEDPTACARADYCVTRVIWEKIRVSIS 121 Query 122 GYLDSVTLSELA 133 +D++TL ++ Sbjct 122 DVIDNITLQDMV 133 Lambda K H 0.316 0.131 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23121682173 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40