bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2519_orf1 Length=264 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P2.24 223 4e-57 > 5833.MAL3P2.24 Length=653 Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 168/300 (56%), Gaps = 39/300 (13%) Query 1 STLYFDGQMNDSRMCLSLALSPTVPGFVEGMQPAAAANHVAAKEFIKNENGQIIAVKVQD 60 S +YFDGQ +DSRM L+L L+ + +V G A NH+ K FIK+EN +++ V+ D Sbjct 208 SLIYFDGQHDDSRMNLNLILTSAIDNYVPGQIGATVCNHMEVKNFIKDENNKLVGVRAID 267 Query 61 RETDEEFTIHCKVVVNCTGPLTDSVRKMDHEDAASLVIPAAGTHIVLPHWYTHKTPFGLL 120 + D+E I KV++N TGP D +RK+ E+ ++ + G H +LP WY+ K G++ Sbjct 268 KINDKEIEIFSKVIINATGPYGDIIRKLADENRKPMIQVSVGCHFILPKWYSTKNN-GMI 326 Query 121 LPQTSDGRVLFLLPWEGRTVAGTTDAPANKAAEPRPGVSEVDFLVNELSAYLRMDPQQMR 180 +P+TSD RVLFLLPWE T+ GTTD +P+ +++FL NELS Y+ + ++++ Sbjct 327 IPKTSDDRVLFLLPWENNTLVGTTDEKRIMQDDPKIQEKDIEFLTNELSKYIHVSAEEIK 386 Query 181 GDIQSVWAGHRPLISQTSEAKD-------------------------------------T 203 DI + W G RPLIS + K T Sbjct 387 NDITAAWCGFRPLISTNNNKKSKFSSNKKKNNNNNINSNSSSNSNNFDDEQNNNNNNIGT 446 Query 204 AGVVRSHTVLVDHESGLISLMGGKWTTYRRMAQDAVDTLLEVHKDKVAASMPCRTKGMKV 263 + RSH ++ D ++GLIS++GGKWT YR+MAQD +D +L + +++ CRTK +K+ Sbjct 447 HEISRSHEIIED-DNGLISILGGKWTIYRKMAQDTLDYILRKYPNELKTKYNCRTKFLKL 505 Lambda K H 0.318 0.132 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83153396610 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40