bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2510_orf1 Length=387 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_3440 518 2e-145 > 5807.cgd3_3440 Length=683 Score = 518 bits (1333), Expect = 2e-145, Method: Compositional matrix adjust. Identities = 242/299 (80%), Positives = 273/299 (91%), Gaps = 0/299 (0%) Query 88 VRGDVVGIDLGTTNSCVAVMEGSQPKVLENSEGMRTTPSVVAFTKDGQRLVGVVAKRQAI 147 + GD++GIDLGTTNSC A++EG+QPKVLENSEGMRTTPSVVAF++DGQRLVG VAKRQAI Sbjct 49 ITGDIIGIDLGTTNSCTAILEGTQPKVLENSEGMRTTPSVVAFSEDGQRLVGEVAKRQAI 108 Query 148 TNPENTFFSTKRLIGRSFDEEAIAKERKILPYKVIRADNGDAWVEGWGKKYSPSQIGAFV 207 TNPENT ++TKRLIGR ++EEAI KE+ ILPYK++RADNGDAWVE G++YSPSQIGAF+ Sbjct 109 TNPENTVYATKRLIGRRYEEEAIKKEQGILPYKIVRADNGDAWVEARGERYSPSQIGAFI 168 Query 208 LMKMKETAESYLGRDVNQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALAY 267 L KMKETAE+YLGR V AVITVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAALAY Sbjct 169 LEKMKETAETYLGRGVKHAVITVPAYFNDSQRQATKDAGSIAGLNVTRIINEPTAAALAY 228 Query 268 GMEKEDGRTIAVYDLGGGTFDVSILEILGGVFEVKATNGNTSLGGEDFDQKVLQFLVNEF 327 GMEK DG+TIAVYDLGGGTFD+SILEILGGVFEVKATNGNTSLGGEDFDQ++L +L+ EF Sbjct 229 GMEKADGKTIAVYDLGGGTFDISILEILGGVFEVKATNGNTSLGGEDFDQRILNYLIQEF 288 Query 328 KKKEGIDLSKDRLALQRLREAAETAKIELSSKLSTEINLPFITADQSGPKHLQVSLSRA 386 KK +GIDLS+D+LALQRLREA+ETAK ELSSK EINLPFITAD GPKHLQ+ LSRA Sbjct 289 KKTQGIDLSRDKLALQRLREASETAKKELSSKTQVEINLPFITADARGPKHLQIKLSRA 347 Lambda K H 0.318 0.134 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 152305329437 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40