bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2496_orf2
Length=182
Score E
Sequences producing significant alignments: (Bits) Value
306537.jk0110 72.4 6e-12
> 306537.jk0110
Length=242
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query 59 FTSMSLLNSSSGLSVGSSPAAAAAAAPAAAAAAGAPPAGAAAAPAAAPAAAAAAAPPAAA 118
F + LNS P A P A G P P +
Sbjct 5 FDRIMALNSKG-------PYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYW 57
Query 119 AAAE------SIVLGGGCFWGLEKLFVEEFKDKLEATCVGYAGGHTPQPTYAQVCSSKTG 172
A A+ IVLG GCFWG+E++F D + T VGYAGG+TP PTY +VC+ +TG
Sbjct 58 AEADGLEQPAQIVLGLGCFWGVERMFW--GVDGVWGTSVGYAGGYTPNPTYREVCTGRTG 115
Query 173 HFEALKISF 181
H E +++ F
Sbjct 116 HAEVVRVIF 124
Lambda K H
0.321 0.131 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 38282551062
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40