bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Eten_2495_orf3
Length=238
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT5G50310.1                                                    75.1    2e-12


> 3702.AT5G50310.1
Length=666

 Score = 75.1 bits (183),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query  19   PLPRLHGMLCVRGSNLVLMGGIMELGSKEITLDDCWTLNLNKRDRWIRVLEGTMHEQEW-  77
            P  R++  + V    L + GG+ME+  KE+TLDD ++LNL+K D W  ++  T  E EW 
Sbjct  439  PCGRINSCMVVGKDTLYIYGGMMEIKDKEVTLDDLYSLNLSKLDEWKCIIPTT--ETEWV  496

Query  78   -------QGADSDHESSNESDGDVSSSSGSSSLESDELD-DGTSESDEEVPRRQGNVQRV  129
                      D D + S +      S       E + +D DG+ +    V   +G  + +
Sbjct  497  EVSDDEEGDEDDDEDDSEDEGNSEESDDEDDDEEVEAMDVDGSVKVGVVVAMIKGQGKSL  556

Query  130  RRRVQ-EEIQQLREQYDLDDPLETPAQGECLRDFFDRTRAHWIEKVSTAGNVVRNSKELT  188
            RR+ +   I+Q+R    L D   TP  GE L+DF+ RT  +W  +++   +     KEL 
Sbjct  557  RRKEKRARIEQIRANLGLSDSQRTPVPGETLKDFYKRTNMYW--QMAAYEHTQHTGKELR  614

Query  189  REAFEAASAR  198
            ++ F+ A  R
Sbjct  615  KDGFDLAETR  624



Lambda     K      H
   0.314    0.131    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 69258123258


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40