bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2481_orf3
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd7_4050 72.0 5e-12
> 5807.cgd7_4050
Length=82
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 11/84 (13%)
Query 20 MARELRDIREFLQTARRKDARKVVIHRSLRRPKGAPFAAAAAAAVITKFKIRCSKHLYTL 79
M ++ D+R+F+ T+RR DAR V + + TKFKIRCS++LYTL
Sbjct 4 MPIQITDLRDFINTSRRADARSVTV-----------VKVKKDNHITTKFKIRCSRYLYTL 52
Query 80 VVADKAKAQKIEGSLPPSLKQQII 103
V+ D KA+K+E SLPP+LK+ I
Sbjct 53 VMKDLEKAKKLESSLPPTLKKTTI 76
Lambda K H
0.322 0.132 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22528463995
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40