bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2470_orf1 Length=151 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0171 228 5e-59 > 5833.PF13_0171 Length=139 Score = 228 bits (580), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 110/138 (79%), Positives = 124/138 (89%), Gaps = 0/138 (0%) Query 13 MKRGRGGAGGNKMKVTLGLPVGALINCCDNSGAKNLYIIAVKGWGSCLNRLPSSSLGDLV 72 MKRGR G NKM++TL LPVGALINCCDNSG KNLYIIAV+G+GSCLNRLP++SLGD+V Sbjct 1 MKRGRAGTLKNKMRITLSLPVGALINCCDNSGGKNLYIIAVQGFGSCLNRLPAASLGDMV 60 Query 73 LATVKKGKPELRKKVHPAVIVRQRRAWRRAEGYFIYFEDNAGVICNNKGEMKGSAITGPV 132 LATVKKGKP+LRKKV A+I RQ +AWRR EGY+IYFEDNAGVI N KGEMKGSAITGPV Sbjct 61 LATVKKGKPDLRKKVLNAIICRQSKAWRRHEGYYIYFEDNAGVIVNPKGEMKGSAITGPV 120 Query 133 AKECAELWPKISAAAPAI 150 A+ECAELWPK+S+AA AI Sbjct 121 ARECAELWPKLSSAASAI 138 Lambda K H 0.320 0.137 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22675567716 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40