bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2462_orf1
Length=249
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0148 186 6e-46
> 5833.PF10_0148
Length=396
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 129/206 (62%), Gaps = 14/206 (6%)
Query 12 MADRKVLVKYYPPDFDFDKLQAKKKILRIQQQQLKRRRGDVFDLPQKRHKNKVMNVRMMY 71
MA+RKVL KY PPDFD DKL KK+L+ +++ R Q + K K+MN+RMMY
Sbjct 1 MAERKVLNKYIPPDFDPDKLMESKKLLKKIEKRKNRN--------QNKTKKKLMNIRMMY 52
Query 72 PFTLKCGTCSEFIYVGTKFNSRVEKVEGEDYLGIIKWRFYGRCPHCRGEICFKTDPQNCD 131
PFTLKC C F YVGTKFNSRVEK++ E YL I W+FYG+C C+ EI FKTDP+N D
Sbjct 53 PFTLKCNKCKTFTYVGTKFNSRVEKLKDETYLNIPIWKFYGKCQECKNEIIFKTDPKNGD 112
Query 132 YVLEWGGTRMCDPLRDQALAAE--RMQKEEEEKIAMDKISQVEASRQGLQQEVLALEQLA 189
Y+L GGTR D ++Q LA + R ++E DKI E E+ EQL
Sbjct 113 YLLIAGGTRTYDAHKEQELADDYYRNSNVKDE----DKIKNTEKQSYNAMLELKMNEQLE 168
Query 190 ELRRLNRRLLDRTAASDAALNFLRQR 215
EL+ +N+R LD+ ++ + ALN L ++
Sbjct 169 ELQNMNKRHLDKFSSINKALNRLYEK 194
Lambda K H
0.322 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 75025471004
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40