bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2455_orf1
Length=178
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL0210c 254 6e-67
> 5833.PFL0210c
Length=161
Score = 254 bits (650), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 140/161 (86%), Gaps = 2/161 (1%)
Query 18 MSDAEEVSFERADAGASLTYPQQAGAIKKNGFCMLKGNPCKVVDYSTSKTGKHGHAKAHI 77
MSD E ++ DAGAS TYP QAGAIKKNG MLK +PCKVVDYSTSKTGKHGHAKAHI
Sbjct 1 MSDHE--MYDNIDAGASQTYPVQAGAIKKNGHVMLKEHPCKVVDYSTSKTGKHGHAKAHI 58
Query 78 VGLDIFTGKKYEDICPTSHNMEVPNVKRSEFQLIDVSDDGFVSLLLDNGDLKSDLTLPKD 137
VG+DIFTG+KYEDICPTSHNM+VP VKR+E QLID+++DGFVSLL DNGD K DL+LPKD
Sbjct 59 VGIDIFTGRKYEDICPTSHNMDVPVVKRTELQLIDITEDGFVSLLYDNGDTKDDLSLPKD 118
Query 138 SDGNLDEVALQVKSLFQEGKGVLVSVLAACGKEKIVACKEL 178
++GNLDEVA Q+++LF GK VLVSVL+ACG+EKI+A KEL
Sbjct 119 TEGNLDEVAKQIRNLFDNGKSVLVSVLSACGQEKIIAAKEL 159
Lambda K H
0.315 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 35812709058
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40