bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2414_orf2
Length=267
Score E
Sequences producing significant alignments: (Bits) Value
7227.CG4839-PB 66.2 1e-09
> 7227.CG4839-PB
Length=1003
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query 1 RQTAVIYPHAVVPGYAAPEASVSVDSDGDSVAQYDFGCGYGTDCWSLGCLVHELLVGEPP 60
RQ A P Y APE + D G D W+LG LV+ELLVG+ P
Sbjct 842 RQNEKTNTFAGTPEYVAPEIIL------------DRGHDRAVDYWALGILVYELLVGKTP 889
Query 61 FKSVSSTAV-AQALCGYHELSLTQQMPAAAVDFIKSLLRPKEEERLG--SRDIKELLKHH 117
F+ V+ + Q L G + + ++P +A ++ L + ERLG + I ++ +H
Sbjct 890 FRGVNQIKIYQQILSGIDVIHMPSRIPKSAQHLVRHLCKQLPAERLGYQRKGIADIKRHS 949
Query 118 FLEGVDCMALHFQPLP 133
+ E +D L + LP
Sbjct 950 WFESLDWQRLKLKQLP 965
Lambda K H
0.318 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84961079145
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40