bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2406_orf2 Length=133 Score E Sequences producing significant alignments: (Bits) Value 51511.ENSCSAVP00000006206 152 3e-36 > 51511.ENSCSAVP00000006206 Length=124 Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 70/115 (60%), Positives = 91/115 (79%), Gaps = 1/115 (0%) Query 20 KKATKSMQPAC-RDYTIHLHKIVHGIQFKKRAPRAIREIRKFAEKVMHTKDVRIDTKLNK 78 + K+M+ R+YTIH+HK +HG+ FKKRAPRA++EIRKFA K+M T DVRIDT+LNK Sbjct 9 RSGVKAMKDVVTREYTIHMHKRIHGMGFKKRAPRAVKEIRKFALKMMGTNDVRIDTRLNK 68 Query 79 HIWSNGIRNLPRRVRVRMARRRNEDEDAAEKFYTLVQHVPVASFAGLGPEYVNEE 133 +WS G+RN+P R+RVR+AR+RNEDED+A K YTLV +VPVASF GL V+ + Sbjct 69 FVWSQGVRNVPYRIRVRLARKRNEDEDSANKLYTLVTYVPVASFKGLNTINVDAD 123 Lambda K H 0.322 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22766716098 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40