bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2341_orf1 Length=268 Score E Sequences producing significant alignments: (Bits) Value 335543.Sfum_2808 223 3e-57 > 335543.Sfum_2808 Length=379 Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 118/240 (49%), Positives = 157/240 (65%), Gaps = 6/240 (2%) Query 29 LYLDYNATTPVDPAVFAALSPFLQERFGNPSSKHAVGVDAAGALRAAREAAAAALGAPPC 88 +YLDYNATTP+DPAV A+ P++ E FGNPSS+HA GV A A++ AR A L P Sbjct 6 IYLDYNATTPIDPAVARAMLPYIHEHFGNPSSRHAYGVTAWNAVQKARGQIAEMLHCAPE 65 Query 89 SIIFTSGATESINWALKSGAKLKRLKGPSPGRIVTCAMEHPAVLRVCEYLRDEEGFELIL 148 I+FTSG TES N A+K A R +G I+T +EHPAVL VC+YL + GF + Sbjct 66 EIVFTSGGTESNNHAIKGIAFANRARG---NHIITSVIEHPAVLEVCDYL-ESLGFRVTR 121 Query 149 CPVLSSGLIDLGAFKALLTADTILISIPLANGEVGVVQPIREVVSVARRICPDALVHADA 208 PV GL+D + +T +TIL+++ AN EVG ++PI E+ ++ARR +H DA Sbjct 122 LPVDRHGLVDPRRAEEAITPETILVTVMHANNEVGTIEPIAEIAAIARR--HGVPMHTDA 179 Query 209 SQAMGKVAVQPVSLGVDLLTVAGHKVYAPKGVGALYIREGINLPPLILGGGQESGLRGGT 268 +Q++GK+ V+ LGVDLL+VAGHK+YAPKGVGALY+R G+ L + G G E R GT Sbjct 180 AQSIGKIPVRVDELGVDLLSVAGHKLYAPKGVGALYVRSGLTLEKFVHGAGHELNRRAGT 239 Lambda K H 0.321 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 85563639990 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40