bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2340_orf2 Length=175 Score E Sequences producing significant alignments: (Bits) Value 187272.Mlg_2534 137 1e-31 > 187272.Mlg_2534 Length=451 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 3/125 (2%) Query 40 HFDCVVLGGGSGGIAFARRAATYGAKVALVERSRMGGTCVNVGCVPKKIMWCAANAFESL 99 H+D +V+GGGSGG+A ARRAA+YGAKVALVERSR+GGTCVNVGCVPKK+MW AA+ ++L Sbjct 4 HYDLLVIGGGSGGMATARRAASYGAKVALVERSRLGGTCVNVGCVPKKVMWSAAHTADAL 63 Query 100 QGMKHLGVEFSDPPRLNWQRLVQNRENYIKRLNRIYEDNLDKSQVHRYYGFATLKPKD-- 157 G P L+W L + R+ YI+RLN IYE N+DKS + G A L Sbjct 64 HRAADYGFRVG-PATLDWAELKRRRDAYIRRLNGIYERNIDKSGITLLTGEARLADARTV 122 Query 158 EANGQ 162 E NG+ Sbjct 123 EVNGE 127 Lambda K H 0.321 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40