bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2300_orf1
Length=196
Score E
Sequences producing significant alignments: (Bits) Value
5085.AFUA_6G08430 62.0 1e-08
> 5085.AFUA_6G08430
Length=224
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query 101 TNLTTGHRLIPASRRPDGTLRRPIKVRPGYTPLEEMKSYKTRHQLSQEQHRATTGAAIPG 160
T+ TG R IP+S RPDG+ RR IKVRPGY P E+++ YK R + ++R + G +PG
Sbjct 10 TDALTGERYIPSSVRPDGSKRREIKVRPGYRPPEDVELYKNRAAAAW-RNRGSGG--VPG 66
Query 161 LTA-AACCEQLTNLSISNKEANASRDPAKR 189
+ E N + SNK NA R AK+
Sbjct 67 AEGLSEASENKANTAASNK--NAKRREAKK 94
Lambda K H
0.311 0.123 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 46123291875
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40