bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2288_orf2 Length=149 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_1250 159 2e-38 > 5807.cgd3_1250 Length=125 Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 73/126 (57%), Positives = 99/126 (78%), Gaps = 1/126 (0%) Query 11 KMALFRRFIEPGRLCVVQYGPDEGKLCFVVDIINGNRILVDGANVTGVRRQSIPIRRVAL 70 KM LF RF+EPGRLC +QYGPD GK+CF++D+IN NRIL+DG + T V RQSIP++R+AL Sbjct 1 KMTLFTRFVEPGRLCRIQYGPDTGKMCFIIDVINMNRILIDGPS-TNVARQSIPLKRLAL 59 Query 71 TDMRLKIPHGVRSVTLRKALEKDDVIKKFNESSWGRKRIAKQRRAALTDFERFKLMVARK 130 TD + KIP G R+ T++K LEKD+ I+ FN++++G+K AK +A +TDFER L+VARK Sbjct 60 TDFKAKIPRGARTGTVKKILEKDNTIENFNKTTYGQKCAAKIFKANMTDFERHALLVARK 119 Query 131 QRAQAV 136 +R V Sbjct 120 KRQYLV 125 Lambda K H 0.325 0.139 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40