bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2269_orf1
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT2G30000.1 198 5e-50
> 3702.AT2G30000.1
Length=110
Score = 198 bits (503), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/108 (87%), Positives = 101/108 (93%), Gaps = 0/108 (0%)
Query 26 AKHHPDLIMCRKQPGIAIGRLCERCDGKCPICDSYVRPHTLVRICDECNYGSFQGRCVIC 85
AKHHPDLIMCRKQPGIAIGRLCE+CDGKC ICDSYVRP TLVRICDECNYGSFQGRCVIC
Sbjct 2 AKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVIC 61
Query 86 GGQGISDAFYCKECCQMEKDRDGCPKIVNLGSAKSDLFYARKQFGAKR 133
GG GISDA+YCKEC Q EKDRDGCPKIVNLGSAK+DLFY RK++G K+
Sbjct 62 GGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 109
Lambda K H
0.327 0.141 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22682284714
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40