bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2215_orf1
Length=475
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0028 271 4e-71
> 5833.PF14_0028
Length=655
Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 241/475 (50%), Gaps = 47/475 (9%)
Query 2 TPKRMPGRPGQKREIDSFLEEIKKRQELQGQKRRLYERLNLSRTEEERCALRFQIAALEN 61
T + G+ +EIDSFLEEIK +Q++ +++ L E+ L+++EEE+ + +I +E
Sbjct 94 TTENKNNTVGKVKEIDSFLEEIKLKQKILDERKSLKEKSQLAKSEEEKIKINKKITEIEQ 153
Query 62 ATRPRGAPPIDLEKESSTNLYLGNLSPEITEEFLCQQFGKHGVITSVKIMYPRTEEEKRR 121
P KE NLYLGNLSPE+TEE+LCQ+FGK G + SVKIMYPR +E+K++
Sbjct 154 NENLLSYIP---RKEKIANLYLGNLSPEVTEEYLCQKFGKFGKVNSVKIMYPRKDEDKKK 210
Query 122 NRNCGFVSFETRPQAESAKNSLDGKSFYGMVIRIGWGKALRPAFGATPTGLSGGFSDSPF 181
R GFV FE AE+AK++LDG G +IRIGW KA+ P FG
Sbjct 211 ARISGFVCFENIEDAENAKDALDGVEMCGNIIRIGWSKAI-PKFGYN------------- 256
Query 182 PSSGFSPPPPSAFSAEVPTATPTPPPPPEAELVEVQVPKDRKVKMVIDLLAKYVAEEGHV 241
+ S ++ + + ++ +P D+K K +IDLLAKYV EEG+
Sbjct 257 -----TKNEISNYNMDKYNTYNNVNVNKKVIII---IPDDKKTKRIIDLLAKYVTEEGYS 308
Query 242 FEQQVMEKFPPESGRLNFIYEKDSPDNIYYRWRVYAFGQGDTLRAWRVEPFFIYSGGRRW 301
FE+ + EK ++ +F++E S YY+WRV++F QGD+ + WR +PF I+S G +
Sbjct 309 FEETIKEK-EKDNPIFHFLFE-SSDLFYYYKWRVFSFAQGDSYKNWRTDPFHIFSNGYLY 366
Query 302 AAPPEKYFQQPAKKKAEAAEERSIRIAARGGERLSAADREELEELLRNITRDRASICAAM 361
PA +K + + + +L +L + + R SIC AM
Sbjct 367 VP--------PAIEKKNKGLLIKRKRGRNKRRHIDEKKKNKLINILSTLNKKRVSICRAM 418
Query 362 SFCMSHGSSSAEVCSCLTESLTLP--DTALTMRLARTYLLSDLLANSSAQTAHAWTYRYH 419
FC H S ++ ++ LT D +++ YLLSD+L N S + +W+YR H
Sbjct 419 IFCTRHSDYSLDIIKIISNFLTDVKYDLLKKVKINLIYLLSDILYNCSNEFFSSWSYRKH 478
Query 420 LEKNLPLIADRWSKEDLRLGVGVGGGSPRTQQEQWQGVERALYKMTKLWEAWGVY 474
+E LP I K ++ + G + +L + +W W +Y
Sbjct 479 IEDELPRIFYFLRKHIKKVDSKIKG----------KLFIDSLINIFNMWNCWAIY 523
Lambda K H
0.316 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 201567787827
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40