bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2194_orf1 Length=234 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_1810 434 1e-120 > 5807.cgd3_1810 Length=431 Score = 434 bits (1116), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 201/230 (87%), Positives = 225/230 (97%), Gaps = 0/230 (0%) Query 5 MDVRVGGKYRLGRKIGSGSFGDIYLGTNISTGDEVAIKLESVRSRHPQLIYESKLYKILT 64 M+VRVGGKYRLGRKIGSGSFGDIYLGTN++ +EVAIKLESV+SRHPQL+YESKLYKIL Sbjct 1 MEVRVGGKYRLGRKIGSGSFGDIYLGTNVTNSEEVAIKLESVKSRHPQLLYESKLYKILA 60 Query 65 GGIGIPTLYWYGIEGDYNVMIIELLGPSLEDLFSICNRKLSLKTVLMLADQMLNRIEFVH 124 GGIG+PT++WYGIEGDYNVMI++LLGPSLEDLF+ICNRK SLKTVLMLADQMLNRIEFVH Sbjct 61 GGIGVPTVHWYGIEGDYNVMILDLLGPSLEDLFTICNRKFSLKTVLMLADQMLNRIEFVH 120 Query 125 SRHFIHRDIKPDNFLIGRGKKMSIVFAIDFGLAKKYRDPRTQSHIPYREGKNLTGTARYA 184 S++FIHRDIKPDNFLIGRGKK+++V+ IDFGLAKKYRDP++Q+HIPYREGKNLTGTARYA Sbjct 121 SKNFIHRDIKPDNFLIGRGKKLNVVYIIDFGLAKKYRDPKSQAHIPYREGKNLTGTARYA 180 Query 185 SVNTHLGIEQSRRDDLEALGYVLMYFNRGSLPWQGLKATTKKDKYDKIME 234 S+NTHLGIEQSRRDDLEALGYVLMYFNRG+LPWQGLKAT+KKDKYDKIME Sbjct 181 SINTHLGIEQSRRDDLEALGYVLMYFNRGTLPWQGLKATSKKDKYDKIME 230 Lambda K H 0.322 0.142 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 66828013670 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40