bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2162_orf1 Length=146 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_3740 167 8e-41 > 5807.cgd5_3740 Length=143 Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 86/139 (61%), Positives = 103/139 (74%), Gaps = 2/139 (1%) Query 3 MSDVESAGAPEEVQVEPEEEDVKDLKTAIKRVLKNALIHDGLARGLHEVAKALDSKRAQA 62 MSDVE E QV+ E+E V DL TAI+ VLKN+ + GL RGL+EV ALDSK+AQ Sbjct 1 MSDVEID--QEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQV 58 Query 63 CFLAESCSEPAYKKLVEGLCKEHGIPLIEVADSKELGQWAGLCRIDNEGAARKVVGASCV 122 CFLAESC E YK+LVE LC+E GIPLI V DSKELG+ AGLC++D EG RKVVGA+ V Sbjct 59 CFLAESCEEDCYKQLVEALCRERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASV 118 Query 123 AVTDFGEQSEALIFLQNHI 141 A+ D+G +SEA +LQ HI Sbjct 119 AIVDYGVESEAYHYLQKHI 137 Lambda K H 0.314 0.131 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40