bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2148_orf1 Length=340 Score E Sequences producing significant alignments: (Bits) Value 5833.PFF0170w 421 2e-116 > 5833.PFF0170w Length=441 Score = 421 bits (1081), Expect = 2e-116, Method: Compositional matrix adjust. Identities = 216/322 (67%), Positives = 264/322 (81%), Gaps = 2/322 (0%) Query 5 VFSFNFAALIPLSALLGAFTEELSLHTGEITGGLLNATFGNAVEMIMSVQALRIGLLEVV 64 +F FNF LIPLSAL+G TE+L+LHTGEI GGLLNATFGN +EMI S+QAL GL+ VV Sbjct 120 IFFFNFMVLIPLSALMGHVTEDLALHTGEIIGGLLNATFGNLMEMIFSIQALNAGLINVV 179 Query 65 KGTLLGSILSNLLLVLGMSFFAGGLHHYLQKFNEKGATCSVTLLLLSCMGIVIPTVAAVD 124 +GTLLGSILSNLLLVLGMSFFAGGL+H++QKFNEKGATCS +LLLLS + I IPTV++ Sbjct 180 QGTLLGSILSNLLLVLGMSFFAGGLYHHIQKFNEKGATCSTSLLLLSSLAITIPTVSSFT 239 Query 125 NGQHGTYNILMISRITALLIGVTYCLFLFFQLYTHIGLFKDDDEDAEQWPMMSWEAATLM 184 + IL +SRITA+LI VTYCLFL FQLYTHI LF+D E E+ P +S + ++ Sbjct 240 TNNNLDV-ILKVSRITAVLIFVTYCLFLLFQLYTHISLFQDK-EMTEEIPQLSVISGSIF 297 Query 185 LFLVTSLVALHSELLVSSIEEVVADYGLSESFIGVILLPIVGNAAEHLTAVTVAMKNKVD 244 L L+T LV++HSE L+ SI+ V+ Y +SE+FIGVILLP+VGNA EHLTAVTVAMKNKVD Sbjct 298 LILITLLVSIHSEFLIYSIDSVIKYYNISENFIGVILLPVVGNATEHLTAVTVAMKNKVD 357 Query 245 LAMGVAVGSSAQIALFVFPFTVLVAWVMGQPLTMAVQPLSAVVMLLSVLVAMAVVQDGES 304 L MGVAVGSSAQIALFV P TVL W++ +P+T+A PLS V++++SV+V MA+VQDGES Sbjct 358 LTMGVAVGSSAQIALFVVPVTVLFGWILNKPMTLAFSPLSTVILVISVIVTMAIVQDGES 417 Query 305 NWLEGVMLMAAYLIISVVFWFD 326 NWLEGV+L++AYLI+ VVFWFD Sbjct 418 NWLEGVLLISAYLIVGVVFWFD 439 Lambda K H 0.325 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 125568424587 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40