bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2120_orf1 Length=134 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000004807 72.4 4e-12 > 8090.ENSORLP00000004807 Length=115 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query 20 MPLCQIVCNTQV-ESGAEEAFLAAVESGLSKILGKPTQYITVTLTRGSVR-HSGSCDPAA 77 MP+ V NT V +S A L+ L+K +GKP QYI V + + G DP A Sbjct 1 MPM--FVVNTNVAKSDVPAALLSEATEELAKAMGKPAQYIAVLINPDQMMMFGGKGDPCA 58 Query 78 SVSVHSIGGISSRTNNMICAEVAALCQQHLKVPVDRVFFHFADVSAANIGIGSRVFG 134 S+HSIG IS N + L +HL + DR++ +F D+ AAN+G + FG Sbjct 59 LCSLHSIGKISGAHNKQYSKLLCGLLNKHLGICQDRIYVNFVDMDAANVGWNNTTFG 115 Lambda K H 0.319 0.130 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22682284714 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40