bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2092_orf3
Length=542
Score E
Sequences producing significant alignments: (Bits) Value
159087.Daro_3922 78.2 6e-13
> 159087.Daro_3922
Length=481
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 126/314 (40%), Gaps = 88/314 (28%)
Query 66 GFLQSPSAAAPAAAAAR-KWDYQQQGA--DWGN------VVAAGMSLKRQSPIEVDAAAL 116
G++ + + PAA A+ W Y GA +W N V A G +RQSPI++
Sbjct 242 GYMLELTHSEPAAQHAQIHWAYDGAGAPENWPNLDPKNKVCAIG---ERQSPIDI----- 293
Query 117 QRLVDHCCSSSSSGSAAAAEEVAATGNLLKVAPAEMRLGNELAAAAAAAAKQVVFDWGLK 176
G E + K P+ R + D G
Sbjct 294 -----------KDGIKVDLEPIK-----FKYQPSTFR----------------IVDNGHT 321
Query 177 LQLKPAAAGDFGSLAAAANKYEVQQFHFHAPAEHTLGG-RSSIELHVVCKCTDTAAAAAA 235
+Q++ GD GS++ YE+ QFHFH P+E + G R + +H+V K D A
Sbjct 322 VQVE---VGD-GSISLTGKTYELVQFHFHRPSEEKVNGQRFDMVVHLVHKSDDGQLA--- 374
Query 236 ANQNLVLGIFFEAKEGAADNPFLLCCERALAEQQQQQEQQEVPAAVREALQQAAAAAAAD 295
V+ + E +NPF+ Q +P L++ A A
Sbjct 375 -----VVAVLLER---GTENPFI------------QTLWNNMP------LEKNMAVAPP- 407
Query 296 DSSKDTVNLKELIDEDKILVTYEGSLTTPPCTENVLWYLRREAIPTSPEQAKRFS-LYLK 354
T++L L+ + TY GSLTTPPC+E VLW + ++ + S +Q FS LY
Sbjct 408 ---TTTIDLNTLLPATRNYYTYMGSLTTPPCSEGVLWLVMKQPVQVSQDQINIFSRLYKN 464
Query 355 RCEEAEDAGGLLEK 368
+ +GG L K
Sbjct 465 NARPIQPSGGRLIK 478
Lambda K H
0.315 0.127 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 239337766417
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40