bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2079_orf1
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFI0880c 199 6e-50
> 5833.PFI0880c
Length=396
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 120/178 (67%), Gaps = 6/178 (3%)
Query 38 AQLRFAALGNYGFDISGQKEVAETLKKTAAEERISFLVSPGSNFPNGVSGANDTKWDEMF 97
QLRFA+LG++G D GQ A+ K+ ER++F+VSPGSNF +GV G ND W ++
Sbjct 25 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLY 84
Query 98 EDVYSDEKGSLRMPFLTVLGAEDWSGNYTAMRERTDLVYGDGSSEEAV------SNSPKW 151
EDVYS+EKG + MPF TVLG DW+GNY A + +Y + + E ++ +N PKW
Sbjct 85 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKW 144
Query 152 TLPNWWYHYAVHFTASTGSAFLSSGHKDMSVGLVFVDTWVLSSAFPFGSVTEKAWKDL 209
+PN+WYHY HFT S+G + + +GHKD++ +F+DTWVLSS FP+ + EKAW DL
Sbjct 145 IMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 202
Lambda K H
0.316 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 53286973563
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40