bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2079_orf1 Length=209 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0880c 199 6e-50 > 5833.PFI0880c Length=396 Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 87/178 (48%), Positives = 120/178 (67%), Gaps = 6/178 (3%) Query 38 AQLRFAALGNYGFDISGQKEVAETLKKTAAEERISFLVSPGSNFPNGVSGANDTKWDEMF 97 QLRFA+LG++G D GQ A+ K+ ER++F+VSPGSNF +GV G ND W ++ Sbjct 25 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLY 84 Query 98 EDVYSDEKGSLRMPFLTVLGAEDWSGNYTAMRERTDLVYGDGSSEEAV------SNSPKW 151 EDVYS+EKG + MPF TVLG DW+GNY A + +Y + + E ++ +N PKW Sbjct 85 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKW 144 Query 152 TLPNWWYHYAVHFTASTGSAFLSSGHKDMSVGLVFVDTWVLSSAFPFGSVTEKAWKDL 209 +PN+WYHY HFT S+G + + +GHKD++ +F+DTWVLSS FP+ + EKAW DL Sbjct 145 IMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDL 202 Lambda K H 0.316 0.131 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 53286973563 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40