bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2063_orf1 Length=160 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_3720 142 3e-33 > 5807.cgd7_3720 Length=1177 Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 61/105 (58%), Positives = 83/105 (79%), Gaps = 0/105 (0%) Query 56 DEQQQEIDSEDTWAVVGSFFEGKGLVSQQVESFNDFASYKLQEIIDAHPPIEIRPSPQYR 115 +++ EI ED+WA++G++F +GLV+QQ+ESFNDF YKLQEI+D HPPI I P QYR Sbjct 10 EQKNDEIQQEDSWALIGTYFRDRGLVNQQLESFNDFIMYKLQEIVDEHPPIIITPQSQYR 69 Query 116 PEEDVELDVRYRLKFGQLSLNRPAAQEKEGMQKNLWPQESRTRNL 160 P+E ++ VRY LKFGQLSL+RP+ +E+EG+ + LWP E+R RNL Sbjct 70 PDEQIDTKVRYVLKFGQLSLSRPSVEEREGVARGLWPNEARLRNL 114 Lambda K H 0.312 0.132 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26871144147 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40