bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2031_orf1
Length=195
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0092 72.4 6e-12
> 5833.PF11_0092
Length=1812
Score = 72.4 bits (176), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query 1 STNATFSMPMRLDIRTQLQALRFLEAGMRRAIAARPMDFVKDSFSIYITDVQPGRWMDIT 60
S NA + ++DI T L AL+ L ++ + +RP DF K + +QPG + +I+
Sbjct 1275 SKNAYIDISFKVDINTPLVALKELRKSLQCLVDSRPSDFCKTKNLYFGYSLQPGHFYEIS 1334
Query 61 VWLSAVEGWGNAPKVLRLRTDM--FLVLQ-RLCTRFGISYQEPLLPVHLNA 108
W+ VEGWGN KV LRTD+ F++LQ R+ ISY+ P + A
Sbjct 1335 FWIKCVEGWGNWRKVFELRTDIYDFIILQLRI---LSISYRLPTQKIGFTA 1382
Lambda K H
0.321 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 45508314650
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40