bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2029_orf1 Length=160 Score E Sequences producing significant alignments: (Bits) Value 3702.AT3G03960.1 148 5e-35 > 3702.AT3G03960.1 Length=549 Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 0/137 (0%) Query 22 HGLGALLKDGYRTFTGIDEVTAKNIEACKTLTDILKTSLGPYGLSKLVVNAWGKRSVTND 81 +G+ ++LK+GYR +G+DE KNIEACK L+ I +TSLGP G++K+V+N K VTND Sbjct 9 YGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTND 68 Query 82 TAAILKDLEVQHPAAKLLVMAAEMHKQEMGGGCNFLLILAGHLLTNADYLLRQGLHLSDV 141 A I+ +LE+QHPAAKLLV+AA+ ++E+G G N + AG LL NA+ L+R GLH S++ Sbjct 69 AATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEI 128 Query 142 IQGYELALDRIPAFLEE 158 I GY A+ + LE+ Sbjct 129 ISGYTKAVSKAVEILEQ 145 Lambda K H 0.321 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 26871144147 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40