bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2029_orf1
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT3G03960.1 148 5e-35
> 3702.AT3G03960.1
Length=549
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 98/137 (71%), Gaps = 0/137 (0%)
Query 22 HGLGALLKDGYRTFTGIDEVTAKNIEACKTLTDILKTSLGPYGLSKLVVNAWGKRSVTND 81
+G+ ++LK+GYR +G+DE KNIEACK L+ I +TSLGP G++K+V+N K VTND
Sbjct 9 YGIQSMLKEGYRHLSGLDEAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTND 68
Query 82 TAAILKDLEVQHPAAKLLVMAAEMHKQEMGGGCNFLLILAGHLLTNADYLLRQGLHLSDV 141
A I+ +LE+QHPAAKLLV+AA+ ++E+G G N + AG LL NA+ L+R GLH S++
Sbjct 69 AATIVNELEIQHPAAKLLVLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEI 128
Query 142 IQGYELALDRIPAFLEE 158
I GY A+ + LE+
Sbjct 129 ISGYTKAVSKAVEILEQ 145
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26871144147
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40